- Sea Crevice
- Seafloor Ruins
- Seafloor Ruins/Central
- Seafloor Ruins/Eastern
- Seafloor Ruins/Western
- Seafoam Cove
- Seaside Cavern
- Seaside Cavern (PMU 6)
- Seaside Cavern (PMU 7)
- Secret Room
- Seeds
- Sentimental Aquifer
- Serene Grace
- Service NPCs
- Shadow Tag
- Sharpness
- Shed Skin
- Sheer Force
- Shell Armor
- Shield Dust
- Shimmering Seabed
- Shiny Pokémon
- Simple
- Skill Link
- Sky Fortress
- Sky Fortress/Dark Path
- Sky Fortress/Dragon Path
- Sky Fortress/Electric Path
- Sky Fortress/Fairy Path
- Sky Fortress/Fire Path
- Sky Fortress/Ice Path
- Sky Fortress/Poison Path
- Sky Fortress/Sky Garden
- Sky Fortress/Steel Path
- Slush Rush
- Sniper
- Snow Cloak
- Snow Warning
- Snowball Game
- Snowbasin Town
- Snowveil Den
- Snowveil Lair
- Solar Power
- Solid Rock
- Soul-Heart
- Soundproof
- Sour Root Cave
- Sour Root Cave (PMU 6)
- Sour Root Cave (PMU 7)
- Southeastern Village
- Southern Sea
- Southwestern Isle
- Spark Cave
- Spectral Thicket
- Spectral Thicket/Dark Route
- Spectral Thicket/Ghost Route
- Spectral Thicket/Psychic Route
- Speed Boost
- Spinda's Cafe
- Staff Team
- Stakeout
- Stall
- Stalwart
- Stamina
- Stance Change
- Stark Volcanic Woods
- Starlit Lagoon
- Static
- Stats
- Status Condition
- Status Condition/Bad Volatile
- Status Condition/Passive Volatile
- Steadfast
- Steam Engine
- Steelworker
- Stench
- Sticky Hold
- Stone Solid
- Storm Drain
- Strong Jaw
- Sturdy
- Suction Cups
- Sugary Sweetland
- Summoner's Platform
- Summoning Pokémon
- Sunken Gardens
- Sunny Hillside
- Sunrise Temple
- Super Luck
- Surge Surfer
- Swarm
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